Basic Information
Locus ID:
BVRB_6g150080
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 53633471 | 53636292 | + | BVRB_6g150080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 7,425.36 Da | 20.50 | 72.42 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 50 | 6.56E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 64 | 8.4E-8 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29050.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021848019.1 | L-type lectin-domain containing receptor kinase IV.1-like [Spinacia oleracea] | 0 |
| Q9SZD5 | L-type lectin-domain containing receptor kinase V.9 OS=Arabidopsis thaliana OX=3702 GN=LECRK59 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9Q6M0 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g150080 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.194.V1.1 |
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq08G2045, Ceq08G2058, Ceq08G2065, Ceq08G2070, Ceq08G2072 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g00100 |
| Poaceae | Echinochloa crus-galli | 1 | CH01.3184 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g00970 |