Basic Information
Locus ID:
BVRB_6g149240
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 52536609 | 52542590 | + | BVRB_6g149240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.41 | 65,144.20 Da | 35.66 | 80.34 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 7 | 246 | 3.29571E-53 | IPR034161 |
| CDD | cd05476 | pepsin_A_like_plant | 266 | 612 | 5.04082E-78 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 266 | 439 | 4.8E-52 | IPR032861 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 3 | 102 | 4.4E-24 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 123 | 241 | 5.5E-21 | IPR032799 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 461 | 608 | 3.1E-25 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 3 | 242 | 3.25E-49 | IPR021109 |
| SUPERFAMILY | SSF50630 | Acid proteases | 261 | 612 | 4.33E-83 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 101 | 252 | 2.6E-33 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 253 | 437 | 1.8E-48 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 1 | 100 | 6.6E-22 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 438 | 615 | 2.3E-39 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 266 | 608 | 36.997276 | IPR033121 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 1 | 271 | 20.931789 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 487 | 498 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 148 | 159 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_048502447.1 | aspartic proteinase CDR1-like [Beta vulgaris subsp. vulgaris] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A443NRF7 | Aspartic proteinase CDR1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00978300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology