Basic Information
Locus ID:
BVRB_6g148520
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 51677139 | 51681918 | - | BVRB_6g148520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 68,236.19 Da | 39.76 | 95.28 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 121 | 179 | 3.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 301 | 570 | 3.8E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 5.2E-12 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 285 | 581 | 3.59E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 189 | 2.42E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 269 | 376 | 1.0E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 377 | 592 | 4.6E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 3.6E-53 | IPR032675 |
| SMART | SM00220 | serkin_6 | 300 | 573 | 1.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 578 | 35.127949 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 306 | 328 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 607 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_010682518.2 | protein NSP-INTERACTING KINASE 3 [Beta vulgaris subsp. vulgaris] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RYF9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_019340 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology