Basic Information
Locus ID:
BVRB_6g145460
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 41105088 | 41113872 | + | BVRB_6g145460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 99,167.91 Da | 29.52 | 90.12 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 61 | 2.3E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 683 | 849 | 6.1E-26 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 387 | 3.4E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 616 | 877 | 6.7E-55 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 666 | 876 | 1.5E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 184 | 2.5E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 408 | 1.5E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 614 | 665 | 9.5E-6 | - |
| SMART | SM00220 | serkin_6 | 630 | 858 | 2.8E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 566 | 855 | 23.340193 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 636 | 658 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 701 | 713 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 862 | 881 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 859 | 881 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010682077.2 | leucine-rich repeat receptor protein kinase HPCA1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology