Basic Information
Locus ID:
BVRB_6g145450
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 41079448 | 41103453 | + | BVRB_6g145450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 104,315.60 Da | 32.77 | 90.04 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 648 | 916 | 1.77409E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 643 | 911 | 1.4E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 313 | 7.65E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 628 | 931 | 1.91E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 297 | 416 | 1.7E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 619 | 717 | 4.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 718 | 931 | 1.3E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 203 | 443 | 1.2E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 202 | 8.2E-37 | IPR032675 |
| SMART | SM00220 | serkin_6 | 642 | 922 | 4.4E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 642 | 916 | 38.378769 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 762 | 774 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 648 | 670 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_019105894.2 | - | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology