Basic Information
Locus ID:
BVRB_6g140870
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
calcium-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 22425638 | 22426432 | + | BVRB_6g140870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.10 | 6,845.63 Da | 38.57 | 77.62 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 3 | 53 | 5.65333E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 2 | 53 | 6.6E-8 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 2 | 55 | 6.7E-14 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 3 | 58 | 7.4E-15 | - |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 1 | 26 | 10.691735 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 27 | 63 | 10.468573 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 4 | 16 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_038706566.1 | probable calcium-binding protein CML16 [Tripterygium wilfordii] | 0 |
| Q9LI84 | Probable calcium-binding protein CML16 OS=Arabidopsis thaliana OX=3702 GN=CML16 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803L7C6 | EF-hand domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology