Basic Information
Locus ID:
BVRB_6g140130
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 20049664 | 20058235 | + | BVRB_6g140130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 90,044.57 Da | 43.26 | 79.25 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 92 | 288 | 5.91433E-100 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 106 | 265 | 3.1E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 270 | 766 | 3.4E-192 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 340 | 598 | 7.28E-90 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 83 | 298 | 9.92E-62 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 620 | 742 | 4.05E-33 | IPR037196 |
| Gene3D | G3DSA:1.20.120.790 | - | 598 | 745 | 2.0E-51 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 338 | 510 | 1.5E-73 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 69 | 313 | 2.1E-89 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 511 | 597 | 4.7E-32 | - |
| SMART | SM00387 | HKATPase_4 | 105 | 267 | 2.7E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 46 | 785 | 5.2E-238 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 103 | 112 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 171 | 188 | 2.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 255 | 272 | 2.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 200 | 222 | 2.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 104 | 126 | 2.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 153 | 170 | 2.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 83 | 103 | 2.0E-63 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 274 | 292 | 2.0E-63 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 80 | 742 | 25.806581 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 756 | 792 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 753 | 792 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_010681164.1 | - | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7L2 | HATPase_c domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology