Basic Information
Locus ID:
BVRB_6g137000
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
E3 ubiquitin-protein ligase RNF182-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 12516194 | 12518573 | - | BVRB_6g137000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 30,185.67 Da | 53.26 | 100.00 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 44 | 96 | 1.3E-8 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 38 | 102 | 6.71E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 33 | 135 | 2.4E-11 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 44 | 99 | 10.099292 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 63 | 72 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021866329.1 | uncharacterized protein LOC110805035 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9RNN5 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_046410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology