Basic Information
Locus ID:
BVRB_6g132370
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 6054795 | 6056992 | + | BVRB_6g132370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 45,837.06 Da | 41.54 | 105.56 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 77 | 1.0E-6 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 163 | 181 | 1.2 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 68 | 389 | 9.35E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 208 | 8.6E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 209 | 390 | 1.9E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 255 | 279 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 160 | 184 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 30.0 | IPR003591 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_021859954.1 | DNA damage-repair/toleration protein DRT100 [Spinacia oleracea] | 0 |
| Q9LJW7 | Receptor-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=RLP43 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S068 | LRRNT_2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_014320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology