Basic Information
Locus ID:
BVRB_5g118210
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Protein DEHYDRATION-INDUCED 19 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 47719811 | 47723538 | + | BVRB_5g118210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 22,872.46 Da | 58.36 | 68.38 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05605 | Drought induced 19 protein (Di19), zinc-binding | 40 | 91 | 6.6E-17 | IPR008598 |
| Pfam | PF14571 | Stress-induced protein Di19, C-terminal | 122 | 203 | 6.9E-12 | IPR027935 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 187 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56280.1 | drought-induced 19. Encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The increase in transcript level is independent from abscisic acid level. Sequence is not similar to any protein of known function. It appears to be a member of plant-specific gene family. It's phosphorylated by AtCPK11 in a Ca(2+)-dependent manner at Thr105 and Ser107 within the AtDi19 bipartite nuclear localization signal | 0 |
| RefSeq | XP_010678879.2 | protein DEHYDRATION-INDUCED 19 homolog 5 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q5JME8 | Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Oryza sativa subsp. japonica OX=39947 GN=DI19-5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R2Q8 | Protein DEHYDRATION-INDUCED 19 homolog 5-like OS=Spinacia oleracea OX=3562 GN=SOVF_113600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg18795, jg25935 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_12171, gene_13620 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah000519 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g118210 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg30634, Sbi_jg58635 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg28499 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00014864 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl55127, Sgl60380 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000005917, gene:ENSEOMG00000022303 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0023700, CQ.Regalona.r1.5BG0025180 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30140000 |
| Apiaceae | Apium graveolens | 1 | AgUnG00028 |
| Arecaceae | Cocos nucifera | 1 | scaffold003335G000040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103717562 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.573.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri18G09975, Ftri1G24231 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1890 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G2059 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g12480 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g22660 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.657 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00033795 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb8G36360 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.4646, BH02.4711, Contig1204.7 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0098020 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0003890.1, HORVU.MOREX.r3.3HG0327790.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_008417, gene-QYE76_044894, gene-QYE76_059112 |
| Poaceae | Oryza coarctata | 4 | Oco01G030970, Oco02G032140, Oco08G007750, Oco09G000420 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g73960.1, LOC_Os05g01730.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G417800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0500829, Pt_Chr0500922 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr03G024180, Chr05G034810, Chr08G017630 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G055200, Tel3E01G882200 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC1AG002530, gene_TRIDC1BG003370 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS1A02G024600.1, TraesCS1B02G031000.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb130380_P001, Zm00001eb139880_P003 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-28061 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12013 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.2415, evm.TU.LG02.995, evm.TU.LG09.970 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g02770 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1081, evm.TU.Scaffold_4_RagTag.427 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-14758, nbisL1-mrna-28934 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-5043, nbisL1-mrna-9532 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-12637, nbisL1-mrna-1899 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000008l.278, evm.TU.utg000010l.150 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00000012, Maker00008820 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-14629, nbisL1-mrna-712 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-1421, nbisL1-mrna-8714 |
| Salicaceae | Populus euphratica | 1 | populus_peu30144 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132601690, gene-LOC132632588 |
| Solanaceae | Solanum chilense | 2 | SOLCI006063500, SOLCI007190800 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107012089, gene-LOC107023097 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_15995 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G0951 |