Basic Information
Locus ID:
BVRB_5g115380
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 43757590 | 43764524 | - | BVRB_5g115380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 61,493.89 Da | 38.82 | 85.78 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 59 | 317 | 6.02175E-135 | - |
| CDD | cd00051 | EFh | 437 | 499 | 3.01251E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 436 | 499 | 5.3E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 366 | 425 | 3.7E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 60 | 318 | 1.1E-77 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 346 | 525 | 2.23E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 41 | 341 | 2.16E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 146 | 326 | 2.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 145 | 4.1E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 327 | 502 | 3.1E-53 | - |
| SMART | SM00054 | efh_1 | 365 | 393 | 6.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 437 | 465 | 2.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 473 | 501 | 3.4E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 60 | 318 | 2.1E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 401 | 429 | 0.0051 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 318 | 49.177147 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 361 | 396 | 15.433954 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 469 | 504 | 14.597092 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 397 | 432 | 10.3012 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 433 | 468 | 14.290241 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 410 | 422 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 374 | 386 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 89 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 446 | 458 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 482 | 494 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 180 | 192 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_010678598.1 | calcium-dependent protein kinase 10 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M1C0 | Calcium-dependent protein kinase 30 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology