Basic Information
Locus ID:
BVRB_5g112780
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 37745859 | 37752393 | - | BVRB_5g112780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 23,241.19 Da | 32.88 | 90.65 | -0.37 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56430.1 | F-box/FBD-like domains containing protein. | 0 |
| RefSeq | XP_010695025.3 | F-box protein At5g03100 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FM88 | Putative FBD-associated F-box protein At5g56430 OS=Arabidopsis thaliana OX=3702 GN=At5g56430 PE=4 SV=1 | 0 | |
| TrEMBL | A0A0J8BD11 | F-box domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_4g097040 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 6 | Ah003362, Ah004975, Ah010432, Ah010433, Ah011144, Ah028126 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_5g112770, BVRB_5g112780 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg42324, Sbi_jg44916 |
| Amaranthaceae | Suaeda glauca | 14 | Sgl35055, Sgl35076, Sgl35086, Sgl40446, Sgl40461, Sgl40471 ... |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000002595, gene:ENSEOMG00000008169 ... |
| Amaranthaceae | Chenopodium quinoa | 7 | CQ.Regalona.r1.4BG0001260, CQ.Regalona.r1.4BG0001450 ... |
| Apiaceae | Apium graveolens | 3 | Ag10G01722, Ag3G02802, Ag9G02757 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00000298, Pov_00000300, Pov_00025260 |