Basic Information
Locus ID:
BVRB_5g102020
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 5650331 | 5655035 | - | BVRB_5g102020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.25 | 74,528.08 Da | 35.67 | 96.50 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 415 | 676 | 3.08839E-87 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 209 | 230 | 1.7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 139 | 195 | 2.0E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 674 | 1.3E-37 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 2 | 34 | 1.2E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 674 | 1.68E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 10 | 230 | 7.48E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 381 | 487 | 2.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 680 | 1.1E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 245 | 6.8E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 123 | 5.8E-26 | IPR032675 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 33 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 409 | 680 | 28.923124 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 415 | 437 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_048501045.1 | - | 0 |
| Q9CAL2 | Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LR13 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology