Basic Information
Locus ID:
BVRB_5g100950
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3910436 | 3917760 | - | BVRB_5g100950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 78,974.43 Da | 46.19 | 79.63 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 435 | 681 | 1.28759E-126 | - |
| CDD | cd00130 | PAS | 61 | 159 | 2.10586E-7 | IPR000014 |
| Pfam | PF00989 | PAS fold | 54 | 157 | 5.2E-8 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 429 | 680 | 3.8E-67 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 54 | 159 | 1.62E-15 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 414 | 679 | 1.18E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 47 | 189 | 2.0E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 422 | 506 | 1.6E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 508 | 692 | 1.9E-59 | - |
| SMART | SM00220 | serkin_6 | 429 | 685 | 7.2E-53 | IPR000719 |
| SMART | SM00091 | pas_2 | 52 | 119 | 1.9E-5 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 54 | 158 | 3.8E-9 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 50 | 96 | 9.813698 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 429 | 696 | 43.283268 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 435 | 456 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 548 | 560 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 542 | 560 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 503 | 516 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 652 | 674 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 589 | 599 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 608 | 630 | 2.0E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 419 | - | - |
| Coils | Coil | Coil | 16 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_010676532.1 | dual specificity protein kinase shkE isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QHM9 | Serine/threonine-protein kinase CTR1 OS=Spinacia oleracea OX=3562 GN=SOVF_177990 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology