Basic Information
Locus ID:
BVRB_5g100880
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Heat Stress Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 3822716 | 3824660 | + | BVRB_5g100880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 36,571.15 Da | 63.45 | 67.69 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 34 | 123 | 2.9E-32 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 31 | 123 | 2.78E-35 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 26 | 124 | 7.8E-38 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 30 | 123 | 2.6E-59 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 73 | 97 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 34 | 57 | 5.4E-21 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 72 | 84 | 5.4E-21 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 85 | 97 | 5.4E-21 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 321 | - | - |
| Coils | Coil | Coil | 195 | 222 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11660.1 | winged-helix DNA-binding transcription factor family protein. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_010676525.2 | heat stress transcription factor B-2b [Beta vulgaris subsp. vulgaris] | 0 |
| Q6Z9C8 | Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QAJ4 | HSF_DOMAIN domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_201140 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology