Basic Information
Locus ID:
BVRB_5g099700
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 2344314 | 2355306 | + | BVRB_5g099700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 92,315.35 Da | 44.13 | 88.25 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 555 | 688 | 1.73198E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 557 | 687 | 2.5E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 711 | 753 | 3.1E-11 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 517 | 753 | 5.44E-61 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 689 | 761 | 1.4E-96 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 516 | 688 | 1.4E-96 | IPR027417 |
| SMART | SM00382 | AAA_5 | 553 | 690 | 1.8E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 660 | 679 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 501 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010676390.2 | ribosome biogenesis ATPase RIX7 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9RKA8 | AAA domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_056920 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology