Basic Information
Locus ID:
BVRB_4g089680
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 31517016 | 31523425 | + | BVRB_4g089680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 58,199.68 Da | 35.70 | 106.11 | 0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 26 | 442 | 5.6E-60 | IPR006153 |
| Gene3D | G3DSA:1.20.1530.20 | - | 15 | 448 | 4.4E-14 | IPR038770 |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 23 | 473 | 1.8E-75 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 95 | 109 | 1.2E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 110 | 118 | 1.2E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 81 | 92 | 1.2E-10 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 150 | 160 | 1.2E-10 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_010675850.1 | sodium/hydrogen exchanger 4 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7N2M8P0 | Sodium/hydrogen exchanger OS=Quercus lobata OX=97700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology