Basic Information
Locus ID:
BVRB_4g089470
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 31044684 | 31052429 | + | BVRB_4g089470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 57,928.88 Da | 33.22 | 85.59 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 69 | 229 | 1.0E-17 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 403 | 469 | 4.9E-8 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 65 | 228 | 1.14E-22 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 69 | 241 | 2.7E-30 | IPR036465 |
| SMART | SM00327 | VWA_4 | 67 | 235 | 9.3E-14 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 69 | 249 | 15.536015 | IPR002035 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19110.1 | inter-alpha-trypsin inhibitor heavy chain-related. | 0 |
| RefSeq | XP_010676034.1 | - | 0 |
| TrEMBL | A0A0K9QQR0 | VWFA domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_152240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology