Basic Information
Locus ID:
BVRB_4g085240
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 22068265 | 22081314 | + | BVRB_4g085240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 104,788.27 Da | 38.99 | 90.58 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 623 | 889 | 1.15332E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 618 | 884 | 6.6E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 59 | 1.6E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 142 | 202 | 2.4E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 377 | 1.07E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 920 | 4.37E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 176 | 1.1E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 286 | 8.5E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 413 | 6.4E-8 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 903 | 1.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 589 | 692 | 8.6E-35 | - |
| SMART | SM00220 | serkin_6 | 617 | 889 | 1.4E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 890 | 37.968884 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010675301.2 | - | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9S2L6 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_000890 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology