Basic Information
Locus ID:
BVRB_4g082400
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the cysteine synthase cystathionine beta- synthase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 13735172 | 13740086 | + | BVRB_4g082400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 34,349.35 Da | 31.74 | 102.06 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01561 | CBS_like | 17 | 307 | 3.00104E-146 | - |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | 13 | 298 | 2.1E-65 | IPR001926 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 8 | 313 | 1.18E-101 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 14 | 307 | 1.2E-133 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 50 | 152 | 1.2E-133 | IPR036052 |
| TIGRFAM | TIGR01139 | cysK: cysteine synthase A | 13 | 311 | 9.5E-141 | IPR005859 |
| TIGRFAM | TIGR01136 | cysKM: cysteine synthase | 13 | 311 | 1.1E-134 | IPR005856 |
| ProSitePatterns | PS00901 | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | 38 | 56 | - | IPR001216 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14880.1 | O-acetylserine (thiol) lyase (OAS-TL) isoform A1. Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence. | 0 |
| RefSeq | XP_010674891.1 | cysteine synthase [Beta vulgaris subsp. vulgaris] | 0 |
| Q00834 | Cysteine synthase OS=Spinacia oleracea OX=3562 PE=1 SV=1 | 0 | |
| TrEMBL | B5U9U9 | Cysteine synthase OS=Spinacia oleracea OX=3562 GN=CSase A PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology