Basic Information
Locus ID:
BVRB_4g077420
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6412342 | 6415854 | + | BVRB_4g077420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 112,697.36 Da | 32.09 | 99.75 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 482 | 542 | 2.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 71 | 6.1E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 712 | 985 | 1.7E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 77 | 134 | 4.0E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 291 | 313 | 0.062 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 707 | 993 | 1.2E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 77 | 383 | 1.41E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 362 | 616 | 1.36E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 710 | 792 | 2.1E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 383 | 623 | 1.8E-65 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 179 | 2.6E-37 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 793 | 1008 | 4.6E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 382 | 2.8E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 180 | 282 | 2.7E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 458 | 481 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 32.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 710 | 988 | 2.8E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 313 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 577 | 48.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 291 | 314 | 7.76586 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 995 | 38.70385 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 716 | 740 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 838 | 850 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 553 | 566 | 5.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 292 | 305 | 5.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_019104470.1 | MDIS1-interacting receptor like kinase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QDZ4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology