Basic Information
Locus ID:
BVRB_4g077400
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 6377758 | 6379527 | - | BVRB_4g077400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 56,282.21 Da | 24.74 | 105.43 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 435 | 454 | 0.61 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 77 | 134 | 1.6E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 291 | 313 | 0.013 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 364 | 383 | 1.8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 71 | 1.2E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 280 | 503 | 8.25E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 324 | 4.42E-65 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 513 | 2.4E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 285 | 5.3E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 185 | 2.7E-42 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 97 | 120 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 289 | 313 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 160.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 291 | 314 | 7.742758 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 435 | 457 | 7.203709 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 292 | 305 | 1.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 433 | 446 | 1.2E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_010674253.1 | - | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KNM5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology