Basic Information
Locus ID:
BVRB_4g072770
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 1818299 | 1823293 | + | BVRB_4g072770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 59,655.47 Da | 39.70 | 85.01 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 430 | 495 | 6.01152E-17 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 52 | 310 | 1.61835E-140 | - |
| Pfam | PF13499 | EF-hand domain pair | 429 | 495 | 3.2E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 53 | 311 | 2.8E-77 | IPR000719 |
| Pfam | PF13833 | EF-hand domain pair | 372 | 420 | 6.3E-4 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 340 | 520 | 1.38E-40 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 326 | 4.59E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 319 | 3.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 138 | 5.3E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 320 | 498 | 9.3E-49 | - |
| SMART | SM00220 | serkin_6 | 53 | 311 | 8.0E-103 | IPR000719 |
| SMART | SM00054 | efh_1 | 430 | 458 | 0.0045 | IPR002048 |
| SMART | SM00054 | efh_1 | 358 | 386 | 2.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 469 | 497 | 1.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 394 | 422 | 3.2 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 354 | 389 | 10.719631 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 311 | 50.731884 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 426 | 461 | 12.755995 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 465 | 500 | 14.178661 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 439 | 451 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 86 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 478 | 490 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_010673649.2 | calcium-dependent protein kinase 8 [Beta vulgaris subsp. vulgaris] | 0 |
| Q38873 | Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CPK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RJ89 | Calcium-dependent protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_065580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology