Basic Information
Locus ID:
BVRB_4g071450
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 516063 | 532197 | - | BVRB_4g071450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 100,445.72 Da | 39.49 | 88.16 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 580 | 853 | 1.13074E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 383 | 424 | 5.0E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 86 | 143 | 1.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 323 | 361 | 0.035 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 577 | 845 | 4.3E-46 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 59 | 4.3E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 551 | 850 | 1.46E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 435 | 4.69E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 538 | 651 | 9.2E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 449 | 5.2E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 652 | 873 | 1.1E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 322 | 1.0E-68 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 85 | 107 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 108 | 131 | 0.0037 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 230 | 253 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 411 | 16.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 574 | 854 | 1.9E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 182 | 205 | 53.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 574 | 854 | 40.682613 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 580 | 602 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 699 | 711 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 899 | 922 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010673522.1 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KLX7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology