Basic Information
Locus ID:
BVRB_4g071160
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 312865 | 337655 | + | BVRB_4g071160 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 53,610.03 Da | 35.61 | 83.10 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 25 | 346 | 8.7E-73 | IPR000490 |
| Pfam | PF07983 | X8 domain | 360 | 432 | 2.3E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 25 | 345 | 7.24E-75 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 350 | 1.2E-107 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 353 | 453 | 2.8E-8 | - |
| SMART | SM00768 | X8_cls | 359 | 445 | 1.7E-40 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010673491.1 | - | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RV46 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_032040 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology