Basic Information
Locus ID:
BVRB_3g063140
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Short Name:
CRK1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 23351835 | 23356989 | + | BVRB_3g063140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.40 | 64,758.48 Da | 43.76 | 85.24 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 123 | 385 | 1.34394E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 124 | 386 | 1.6E-69 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 415 | 569 | 3.28E-17 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 117 | 417 | 1.75E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 407 | 569 | 9.1E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 214 | 404 | 1.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 213 | 1.4E-21 | - |
| SMART | SM00220 | serkin_6 | 124 | 386 | 3.7E-97 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 429 | 464 | 8.739058 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 124 | 386 | 49.742504 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 130 | 156 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 248 | 260 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010673049.1 | CDPK-related kinase 7 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LET1 | CDPK-related kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QVG2 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_141970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology