Basic Information
Locus ID:
BVRB_3g061020
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 19745803 | 19750267 | + | BVRB_3g061020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 70,191.63 Da | 47.29 | 77.18 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 14 | 269 | 6.07166E-133 | - |
| Pfam | PF00069 | Protein kinase domain | 15 | 268 | 8.1E-68 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 296 | 7.01E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 94 | 3.2E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 95 | 279 | 5.5E-57 | - |
| SMART | SM00220 | serkin_6 | 15 | 269 | 6.7E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 269 | 46.859169 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 44 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 136 | 148 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 478 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_010672750.1 | serine/threonine-protein kinase Nek6 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MA52 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology