Basic Information
Locus ID:
BVRB_3g059540
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 16587796 | 16589497 | - | BVRB_3g059540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 47,061.70 Da | 44.01 | 85.44 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 199 | 240 | 1.8E-11 | IPR006652 |
| Pfam | PF00646 | F-box domain | 24 | 63 | 2.8E-5 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 156 | 191 | 2.0E-4 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 122 | 374 | 1.7E-38 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 73 | 7.59E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 72 | 338 | 4.2E-38 | IPR015915 |
| SMART | SM00612 | kelc_smart | 207 | 254 | 7.8E-8 | IPR006652 |
| SMART | SM00612 | kelc_smart | 157 | 205 | 4.1E-7 | IPR006652 |
| SMART | SM00256 | fbox_2 | 26 | 66 | 3.1E-5 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_010672540.2 | F-box/kelch-repeat protein At2g44130 [Beta vulgaris subsp. vulgaris] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QG85 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology