Basic Information
Locus ID:
BVRB_3g059200
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
inositol 1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 15716191 | 15722033 | - | BVRB_3g059200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 127,576.79 Da | 46.33 | 73.58 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 597 | 943 | 3.29996E-107 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 602 | 934 | 4.2E-14 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 232 | 575 | 3.11E-22 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 574 | 966 | 1.73E-58 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 168 | 402 | 3.6E-10 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 424 | 578 | 1.4E-5 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 579 | 974 | 1.6E-98 | IPR036691 |
| SMART | SM00320 | WD40_4 | 274 | 312 | 3.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 493 | 530 | 32.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 453 | 491 | 130.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 219 | 260 | 16.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 595 | 949 | 1.0E-81 | IPR000300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1121 | 1154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1121 | 1135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1136 | 1154 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_010672504.2 | type I inositol polyphosphate 5-phosphatase 12 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803KTV9 | IPPc domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology