Basic Information
Locus ID:
BVRB_3g058420
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 13823795 | 13827059 | - | BVRB_3g058420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 39,749.48 Da | 42.42 | 90.63 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 55 | 306 | 2.5E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 313 | 7.89E-55 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 125 | 323 | 1.5E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 117 | 4.5E-24 | - |
| SMART | SM00220 | serkin_6 | 44 | 320 | 1.0E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 320 | 24.188234 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09010.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010672400.2 | - | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QX37 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_131600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 7 | gene_15779, gene_15780, gene_15781, gene_15782, gene_15783 ... |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g058420 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00006392, GOSA_00006398 |