Basic Information
Locus ID:
BVRB_3g055730
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
40s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 8589762 | 8592196 | + | BVRB_3g055730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 7,170.18 Da | 42.69 | 92.66 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 1 | 60 | 8.1E-17 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 1 | 61 | 1.7E-18 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 1 | 64 | 1.9E-27 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 1 | 60 | 1.8E-8 | IPR027486 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47370.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_021842254.1 | - | 0 |
| Q9STY6 | Small ribosomal subunit protein uS10y OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1 | 0 | |
| TrEMBL | A0A0J8CQ42 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology