Basic Information
Locus ID:
BVRB_3g054920
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 7525405 | 7530241 | + | BVRB_3g054920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 62,285.47 Da | 42.12 | 82.07 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 70 | 328 | 1.42982E-138 | - |
| CDD | cd00051 | EFh | 448 | 513 | 1.0492E-10 | IPR002048 |
| CDD | cd00051 | EFh | 376 | 436 | 7.37654E-14 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 390 | 436 | 4.8E-7 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 71 | 329 | 2.3E-78 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 447 | 512 | 2.3E-10 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 49 | 353 | 2.16E-88 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 369 | 513 | 3.48E-38 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 337 | 6.1E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 338 | 515 | 2.4E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 156 | 1.5E-29 | - |
| SMART | SM00220 | serkin_6 | 71 | 329 | 4.4E-102 | IPR000719 |
| SMART | SM00054 | efh_1 | 376 | 404 | 8.5E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 448 | 476 | 0.006 | IPR002048 |
| SMART | SM00054 | efh_1 | 487 | 515 | 6.1E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 412 | 440 | 1.8 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 71 | 329 | 50.011051 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 372 | 407 | 14.513405 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 408 | 443 | 8.487999 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 444 | 479 | 12.867577 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 483 | 518 | 13.258112 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 191 | 203 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 77 | 100 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 385 | 397 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 457 | 469 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 421 | 433 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 496 | 508 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010671825.1 | calcium-dependent protein kinase 24 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KTC5 | Calcium-dependent protein kinase 24 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology