Basic Information
Locus ID:
BVRB_3g054500
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 7043388 | 7047705 | + | BVRB_3g054500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 108,566.68 Da | 31.73 | 104.80 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 290 | 304 | 0.62 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 457 | 516 | 9.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 695 | 969 | 3.8E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 68 | 1.6E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 75 | 398 | 8.63E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 363 | 615 | 2.04E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 971 | 1.75E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 332 | 624 | 1.8E-85 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 139 | 5.3E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 978 | 1.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 227 | 4.4E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 228 | 331 | 1.2E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 771 | 2.6E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 336 | 360 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 575 | 598 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 264 | 288 | 34.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 693 | 976 | 2.2E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 408 | 432 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 141 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 479 | 503 | 23.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 693 | 976 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_010671767.2 | - | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology