Basic Information
Locus ID:
BVRB_2g040120
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 32995945 | 33001710 | + | BVRB_2g040120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 54,553.31 Da | 54.70 | 55.28 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 392 | 449 | 1.1E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 225 | 281 | 1.2E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 383 | 451 | 8.89E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 222 | 283 | 1.83E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 218 | 284 | 8.9E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 376 | 452 | 3.5E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 224 | 282 | 2.2E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 391 | 450 | 2.2E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 386 | 451 | 37.722832 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 219 | 283 | 24.684505 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_010670218.3 | probable WRKY transcription factor 4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QGS9 | WRKY transcription factor OS=Spinacia oleracea OX=3562 GN=SOVF_180300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology