Basic Information
Locus ID:
BVRB_2g040100
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 32858686 | 32865841 | - | BVRB_2g040100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 77,063.53 Da | 47.74 | 85.17 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 88 | 178 | 8.5E-8 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 275 | 544 | 1.4E-89 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 80 | 179 | 3.06E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 73 | 230 | 2.8E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 91 | 190 | 4.7E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 91 | 162 | 10.840413 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 275 | 568 | 91.524811 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 347 | - | - |
| Coils | Coil | Coil | 604 | 631 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_010670217.2 | - | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LSD0 | BTB/POZ domain-containing protein At5g03250-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology