Basic Information
Locus ID:
BVRB_2g039230
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 29285172 | 29288640 | - | BVRB_2g039230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 54,267.87 Da | 39.28 | 92.93 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 25 | 344 | 2.3E-86 | IPR000490 |
| Pfam | PF07983 | X8 domain | 362 | 432 | 8.2E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 25 | 344 | 1.37E-86 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 351 | 6.0E-116 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 355 | 452 | 6.7E-10 | - |
| SMART | SM00768 | X8_cls | 361 | 446 | 1.4E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 259 | 272 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010670126.2 | glucan endo-1,3-beta-glucosidase 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803N172 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology