Basic Information
Locus ID:
BVRB_2g038860
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 27808343 | 27811837 | - | BVRB_2g038860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.25 | 54,416.32 Da | 37.55 | 82.22 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 29 | 56 | 3.2E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 90 | 1.24E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 58 | 3.1E-6 | - |
| SMART | SM00256 | fbox_2 | 21 | 62 | 1.8E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 166 | 357 | 3.2E-17 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048494142.1 | - | 0 |
| TrEMBL | A0A2P6S111 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 6 | gene_18276, gene_3818, gene_3820, gene_3821, gene_3822 ... |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g038860 |