halophFGD

Basic Information

Locus ID: BVRB_2g038660

Species & Taxonomic ID: Beta vulgaris & 3555

Genome Assembly: GCA_000511025.2

Description: Belongs to the universal ribosomal protein uS3 family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	27510595	27519099	+	BVRB_2g038660

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.87	16,513.98 Da	19.71	95.41	-0.31

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Gene3D	G3DSA:3.30.1140.32	-	21	128	3.4E-14	IPR036419

KEGG Pathway

KO Term:

K02985 (small subunit ribosomal protein S3e)

Pathway:

ko03010 (Ribosome) map03010 (Ribosome)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G35530.1	Ribosomal protein S3 family protein.
RefSeq	XP_010667658.1	-
Swiss-Prot	Q9FJA6	Small ribosomal subunit protein uS3x OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1
TrEMBL	A0A0J8B2L2	-

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg15374, jg25206, jg31747, jg32882, jg36625
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10991, gene_13126
Amaranthaceae	Atriplex hortensis	4	Ah015266, Ah031573, Ah037672, Ah037674
Amaranthaceae	Beta vulgaris	2	BVRB_2g034020, BVRB_2g038660
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg24630, Sbi_jg26824, Sbi_jg33740, Sbi_jg8492
Amaranthaceae	Salicornia europaea	2	Seu_jg20101, Seu_jg8433
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00007094, GOSA_00014689
Amaranthaceae	Suaeda glauca	3	Sgl23906, Sgl29075, Sgl47607
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000007207, gene:ENSEOMG00000008791 ... gene:ENSEOMG00000021235, gene:ENSEOMG00000025770, gene:ENSEOMG00000032905, gene:ENSEOMG00000044681
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.3BG0017200, CQ.Regalona.r1.5AG0011750 ... CQ.Regalona.r1.5BG0012510, CQ.Regalona.r1.8AG0015380, CQ.Regalona.r1.8BG0016620
Anacardiaceae	Pistacia vera	2	pistato.v30259900, pistato.v30261030
Apiaceae	Apium graveolens	3	Ag10G01428, Ag5G01533, Ag8G00281
Arecaceae	Cocos nucifera	4	COCNU_08G005670, COCNU_09G000700, contig69448580G000010 ... scaffold007470G000050
Arecaceae	Phoenix dactylifera	8	gene-LOC103696489, gene-LOC103703275, gene-LOC103704894 ... gene-LOC103705774, gene-LOC103712746, gene-LOC120103712, gene-LOC120103821, gene-LOC120111690
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.1216.V1.1, AsparagusV1_04.1015.V1.1 ... AsparagusV1_07.3633.V1.1
Asteraceae	Flaveria trinervia	5	Ftri13G24352, Ftri13G25174, Ftri13G27803, Ftri18G02710 ... Ftri3G28550
Brassicaceae	Arabidopsis thaliana	3	AT2G31610.1, AT3G53870.1, AT5G35530.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10017144m.g.v1.0, Thhalv10017148m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp4g14040.v2.2, Sp7g06820.v2.2, SpUn1065_0010.v2.2
Brassicaceae	Brassica nigra	7	BniB01g012680.2N, BniB05g059030.2N, BniB06g020590.2N ... BniB06g020620.2N, BniB08g019640.2N, BniB08g019730.2N, BniB08g031780.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G0822, Ceq03G2135, Ceq06G0805
Casuarinaceae	Casuarina glauca	4	Cgl02G0832, Cgl02G0837, Cgl03G2279, Cgl06G0830
Cymodoceaceae	Cymodocea nodosa	3	gene.Cymno04g10730, gene.Cymno09g01280, gene.Cymno11g10040
Dunaliellaceae	Dunaliella salina	1	Dusal.0669s00001.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate02g23420, gene.Thate05g04960, gene.Thate05g25710 ... gene.Thate07g06260
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-179
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG05.1011, evm.TU.LG05.1018, evm.TU.LG07.679
Plantaginaceae	Plantago ovata	5	Pov_00002892, Pov_00003049, Pov_00004056, Pov_00010292 ... Pov_00039579
Plumbaginaceae	Limonium bicolor	1	Lb6G30919
Poaceae	Echinochloa crus-galli	6	AH03.3662, AH08.415, BH08.426, CH03.4107, CH03.4189 ... CH08.500
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_7AG0576570, gene-QOZ80_7BG0608020 ... gene-QOZ80_8AG0618610, gene-QOZ80_8BG0646090
Poaceae	Lolium multiflorum	4	gene-QYE76_032741, gene-QYE76_032771, gene-QYE76_039751 ... gene-QYE76_039759
Poaceae	Oryza coarctata	3	Oco13G012360, Oco15G002790, Oco16G002810
Poaceae	Oryza sativa	2	LOC_Os03g38000.1, LOC_Os07g41750.1
Poaceae	Paspalum vaginatum	2	gene-BS78_02G346400, gene-BS78_07G055500
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0101329, Pt_Chr0101332, Pt_Chr0306244, Pt_Chr0306302 ... Pt_Chr0402338
Poaceae	Sporobolus alterniflorus	9	Chr0G018860, Chr16G001820, Chr17G001670, Chr19G002510 ... Chr20G011600, Chr27G007100, Chr27G014810, Chr28G011370, Chr29G011000
Poaceae	Thinopyrum elongatum	2	Tel2E01G335900, Tel7E01G510000
Poaceae	Triticum dicoccoides	5	gene_TRIDC2AG021810, gene_TRIDC2BG026230 ... gene_TRIDC3AG013230, gene_TRIDC3AG013240, gene_TRIDC7BG032110
Poaceae	Triticum aestivum	7	TraesCS2A02G172000.1, TraesCS2B02G198400.1 ... TraesCS2D02G179300.1, TraesCS3A02G107700.1, TraesCS3A02G107800.1, TraesCS7B02G198400.1, TraesCS7D02G291300.1
Poaceae	Zea mays	3	Zm00001eb172130_P001, Zm00001eb327250_P001 ... Zm00001eb415410_P001
Poaceae	Zoysia japonica	2	nbis-gene-39012, nbis-gene-41674
Poaceae	Zoysia macrostachya	2	Zma_g22526, Zma_g23665
Portulacaceae	Portulaca oleracea	9	evm.TU.LG02.2379, evm.TU.LG02.2383, evm.TU.LG02.2386 ... evm.TU.LG03.1852, evm.TU.LG07.826, evm.TU.LG15.106, evm.TU.LG23.605, evm.TU.LG23.607, evm.TU.LG23.611
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g25410, gene.Posoc08g04100, gene.Posoc09g10210
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_10_RagTag.556, evm.TU.Scaffold_12_RagTag.322 ... evm.TU.Scaffold_13_RagTag.763, evm.TU.Scaffold_4_RagTag.1799
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-12961, nbisL1-mrna-24475, nbisL1-mrna-25777 ... nbisL1-mrna-30276, nbisL1-mrna-30288, nbisL1-mrna-8211
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-13672, nbisL1-mrna-19720, nbisL1-mrna-3067
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-16136, nbisL1-mrna-19598, nbisL1-mrna-4593
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000008l.1014, evm.TU.utg000015l.446 ... evm.TU.utg000027l.378, evm.TU.utg000033l.393
Rhizophoraceae	Kandelia obovata	4	Maker00000839, Maker00014964, Maker00015426, Maker00018253
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-14868, nbisL1-mrna-3990, nbisL1-mrna-4365 ... nbisL1-mrna-5605
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-1099, nbisL1-mrna-11821, nbisL1-mrna-15042 ... nbisL1-mrna-8144
Salicaceae	Populus euphratica	5	populus_peu12591, populus_peu22390, populus_peu28589 ... populus_peu30057, populus_peu37919
Solanaceae	Lycium barbarum	3	gene-LOC132617574, gene-LOC132635969, gene-LOC132640861
Solanaceae	Solanum chilense	3	SOLCI005676900, SOLCI006031400, SOLCI007239300
Solanaceae	Solanum pennellii	3	gene-LOC107026246, gene-LOC107028724, gene-LOC107028851
Tamaricaceae	Reaumuria soongarica	3	STRG.17704_chr09_-, STRG.32761_chr09_-, gene_13387
Tamaricaceae	Tamarix chinensis	2	TC10G1833, TC11G2035
Zosteraceae	Zostera marina	3	Zosma01g10380.v3.1, Zosma03g25530.v3.1, Zosma06g13210.v3.1