Basic Information
Locus ID:
BVRB_2g036660
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 19351028 | 19353108 | - | BVRB_2g036660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 66,626.27 Da | 46.84 | 76.34 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 409 | 531 | 1.09402E-59 | - |
| Pfam | PF16953 | Protein-only RNase P | 351 | 577 | 9.7E-71 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 101 | 309 | 9.8E-76 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 108 | 580 | 3.0E-233 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 369 | 543 | 3.0E-233 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 188 | 222 | 9.54735 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 107 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_010669732.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial [Beta vulgaris subsp. vulgaris] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8FP36 | ribonuclease P OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_2g036660 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology