Basic Information
Locus ID:
BVRB_2g035950
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17518756 | 17522580 | + | BVRB_2g035950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 73,339.06 Da | 43.50 | 85.75 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 76 | 7.3E-11 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 375 | 630 | 1.9E-29 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 188 | 1.0E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 222 | 3.25E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 375 | 640 | 2.22E-47 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 445 | 6.6E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 248 | 8.8E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 146 | 1.0E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 646 | 8.0E-36 | - |
| SMART | SM00369 | LRR_typ_2 | 151 | 174 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 3.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 175 | 197 | 53.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 645 | 25.290686 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 353 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_048494638.1 | pollen receptor-like kinase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MET9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology