Basic Information
Locus ID:
BVRB_2g035920
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17465962 | 17472541 | - | BVRB_2g035920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 93,585.16 Da | 54.59 | 71.89 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 507 | 766 | 7.193E-84 | - |
| CDD | cd01989 | STK_N | 20 | 172 | 1.73937E-54 | - |
| Pfam | PF00069 | Protein kinase domain | 503 | 760 | 6.0E-39 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 20 | 167 | 4.5E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 20 | 169 | 5.11E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 484 | 763 | 3.69E-67 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 781 | 1.0E-49 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 19 | 171 | 2.1E-13 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 465 | 573 | 9.7E-26 | - |
| SMART | SM00220 | serkin_6 | 501 | 770 | 8.4E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 501 | 770 | 34.562588 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 619 | 631 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 775 | 835 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 251 | - | - |
| Coils | Coil | Coil | 367 | 387 | - | - |
| Coils | Coil | Coil | 427 | 482 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010669606.1 | U-box domain-containing protein 35 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LZ29 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology