Basic Information
Locus ID:
BVRB_2g035350
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 16130733 | 16138114 | + | BVRB_2g035350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 87,301.76 Da | 52.20 | 75.13 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 157 | 1.35383E-59 | - |
| Pfam | PF00582 | Universal stress protein family | 18 | 128 | 4.6E-7 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 462 | 714 | 7.6E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 437 | 720 | 5.8E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 130 | 9.31E-8 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 143 | 2.5E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 534 | 737 | 1.1E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 426 | 533 | 2.5E-24 | - |
| SMART | SM00220 | serkin_6 | 461 | 721 | 1.6E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 461 | 724 | 36.400009 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 759 | 784 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 233 | - | - |
| Coils | Coil | Coil | 326 | 372 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_048494654.1 | LOW QUALITY PROTEIN: U-box domain-containing protein 51 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LYV6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology