Basic Information
Locus ID:
BVRB_2g034350
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 14016658 | 14022452 | + | BVRB_2g034350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 84,224.62 Da | 47.01 | 75.10 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 428 | 688 | 7.0004E-85 | - |
| CDD | cd01989 | STK_N | 15 | 146 | 3.75905E-52 | - |
| Pfam | PF00069 | Protein kinase domain | 426 | 680 | 2.1E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 405 | 681 | 9.17E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 16 | 143 | 7.87E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 495 | 696 | 3.8E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 15 | 146 | 5.1E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 494 | 2.4E-25 | - |
| SMART | SM00220 | serkin_6 | 422 | 685 | 3.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 422 | 685 | 34.689796 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 540 | 552 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 751 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 751 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 225 | - | - |
| Coils | Coil | Coil | 355 | 394 | - | - |
| Coils | Coil | Coil | 281 | 308 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_048494692.1 | U-box domain-containing protein 51 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG5 | U-box domain-containing protein 51 OS=Arabidopsis thaliana OX=3702 GN=PUB51 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803N1Z3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology