Basic Information
Locus ID:
BVRB_2g032810
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 11458855 | 11461643 | + | BVRB_2g032810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 92,963.61 Da | 36.82 | 102.82 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 463 | 522 | 7.3E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 650 | 834 | 8.0E-35 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 240 | 262 | 1.4 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 273 | 560 | 1.1E-43 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 9 | 346 | 4.08E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 631 | 834 | 1.75E-51 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 134 | 4.7E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 473 | 596 | 2.9E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 237 | 8.5E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 631 | 837 | 1.3E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 238 | 391 | 3.7E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 392 | 472 | 2.3E-16 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 262 | 286 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 45 | 69 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 38.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 648 | 841 | 6.3E-9 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 142 | 166 | 130.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 45 | 71 | 79.0 | - |
| SMART | SM00369 | LRR_typ_2 | 509 | 533 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 461 | 485 | 40.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 215 | 241 | 3.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 648 | 841 | 29.672226 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 784 | 796 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 654 | 677 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 509 | 522 | 4.5E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 241 | 254 | 4.5E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_010669046.2 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| F4I2N7 | Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology