Basic Information
Locus ID:
BVRB_2g032680
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 11263969 | 11269450 | - | BVRB_2g032680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 101,927.54 Da | 38.49 | 94.78 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 595 | 869 | 1.11993E-95 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 71 | 1.5E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 156 | 1.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 381 | 440 | 5.1E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 593 | 866 | 3.6E-46 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 200 | 219 | 1.4 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 342 | 378 | 3.8E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 577 | 881 | 8.63E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 449 | 3.06E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 549 | 666 | 8.4E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 667 | 887 | 1.9E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 337 | 5.9E-77 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 340 | 464 | 1.4E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 195 | 218 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 427 | 449 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 169 | 52.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 589 | 870 | 2.6E-46 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 403 | 426 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 143 | 3.2E-5 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 589 | 870 | 40.838085 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 714 | 726 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 595 | 617 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 943 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010668632.2 | - | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4J8 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_106740 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology