Basic Information
Locus ID:
BVRB_2g030340
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 7491384 | 7494540 | - | BVRB_2g030340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 68,154.45 Da | 44.00 | 103.25 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 262 | 285 | 0.73 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 558 | 578 | 1.3 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 235 | 258 | 3.3E-4 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 532 | 553 | 0.079 | IPR001611 |
| Pfam | PF12937 | F-box-like | 70 | 103 | 1.3E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 338 | 583 | 1.08E-37 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 62 | 105 | 3.92E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 172 | 409 | 1.37E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 503 | 637 | 8.6E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 134 | 248 | 2.3E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 249 | 438 | 2.1E-38 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 61 | 109 | 7.8E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 443 | 502 | 4.3E-7 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 262 | 287 | 1.6E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 210 | 235 | 5.2E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 448 | 473 | 28.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 368 | 393 | 0.13 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 184 | 209 | 0.0017 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 556 | 580 | 0.061 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 474 | 499 | 2.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 236 | 261 | 9.7E-4 | IPR006553 |
| SMART | SM00256 | fbox_2 | 71 | 115 | 0.0014 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 342 | 367 | 0.05 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 530 | 555 | 3.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 394 | 419 | 17.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 503 | 528 | 0.12 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 582 | 607 | 160.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_010696236.1 | EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RGU6 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology