Basic Information
Locus ID:
BVRB_2g024380
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1115885 | 1124019 | - | BVRB_2g024380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 81,122.73 Da | 36.67 | 98.65 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 417 | 678 | 3.54592E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 412 | 673 | 1.2E-48 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 15 | 188 | 1.45E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 396 | 685 | 4.78E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 486 | 2.7E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 487 | 697 | 9.6E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 12 | 206 | 8.6E-31 | IPR032675 |
| SMART | SM00220 | serkin_6 | 411 | 679 | 5.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 679 | 39.537758 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 417 | 440 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 531 | 543 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_048495568.1 | leucine-rich repeat receptor protein kinase HPCA1 isoform X5 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M3M9 | LRRNT_2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology