Basic Information
Locus ID:
BVRB_1g014100
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 31259861 | 31261274 | + | BVRB_1g014100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 17,777.40 Da | 45.44 | 113.40 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00112 | Papain family cysteine protease | 1 | 35 | 3.5E-5 | IPR000668 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 26 | 96 | 4.0E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 99 | 3.75E-19 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 22 | 86 | 1.4E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 153 | 10.647862 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02800.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010693108.1 | probable serine/threonine-protein kinase PBL7 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q0WRY5 | Probable serine/threonine-protein kinase PBL7 OS=Arabidopsis thaliana OX=3702 GN=PBL7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JVR4 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah032975 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g014100 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl71856, Sgl75417 |
| Brassicaceae | Brassica nigra | 1 | BniB02g057430.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0550, Ceq06G2215 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G2333 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG15.1319 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g02450 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18771 |
| Zosteraceae | Zostera marina | 1 | Zosma03g09700.v3.1 |