Basic Information
Locus ID:
BVRB_1g011030
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 17447576 | 17452807 | + | BVRB_1g011030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 67,483.76 Da | 27.99 | 85.54 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 26 | 259 | 2.00844E-59 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 347 | 499 | 3.0E-28 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 27 | 258 | 9.0E-53 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 25 | 258 | 7.46E-54 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 546 | 3.05E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 423 | 9.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 567 | 1.1E-7 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 24 | 261 | 4.6E-57 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 424 | 497 | 9.3E-22 | - |
| SMART | SM00220 | serkin_6 | 346 | 555 | 3.5E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 599 | 23.184719 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 470 | 482 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 352 | 374 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010680208.2 | L-type lectin-domain containing receptor kinase S.6 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FHX3 | L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R9V1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_090070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology