Basic Information
Locus ID:
BVRB_1g001950
Species & Taxonomic ID:
Beta vulgaris & 3555
Genome Assembly:
GCA_000511025.2
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 2068503 | 2072707 | + | BVRB_1g001950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 43,544.19 Da | 37.07 | 66.34 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 56 | 195 | 1.4E-20 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 40 | 214 | 1.83E-37 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 65 | 219 | 3.6E-28 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 55 | 214 | 30.435226 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 0 |
| RefSeq | XP_010686990.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M386 | NAC domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology